Unify gdiff GraphML and traversal error handling#91
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Summary
BNGFileErrorfor malformed or unsupported GraphML node shapes instead of surfacing vague runtime/print behavior_get_node_from_keylist()return cleanly when child graphs use list vs dict node layoutsgdiffregression coverage intests/test_gdiff.pyWhy
The current code reports malformed GraphML inconsistently and keylist traversal can fail on legitimate node-shape variations. This makes failures harder to diagnose than they need to be.
Testing
uv run python -m pytest -q tests/test_gdiff.pyuvx black --check bionetgen/core/tools/gdiff.py tests/test_gdiff.py